Plots diagnostic plots

Usage

plot_diagnostic(
  IDs,
  calls.auto,
  calls.sca,
  z.scores,
  inDirichlet.auto,
  inDirichlet.sca,
  min_reads = 30000,
  max_reads = 1e+09,
  addLabels = FALSE
)

Arguments

IDs: a list or predefined piped string of sample IDs to look for
calls.auto: the autosomal karyotype calls for the samples
calls.sca: the sex chromosomal karyotype calls for the samples
z.scores: the autosomal z-scores for the samples
inDirichlet.auto: the dirichlet parameters for the autosomes
inDirichlet.sca: the dirichlet parameters for the sex chromosomes
min_reads: min number of reads per sample
max_reads: max number of reads per sample
addLabels: add "A", "B" and "C" to the plot panels?

Value

plots